feat: implement unified configuration loading and logging setup across entry points

This commit is contained in:
2025-08-06 22:17:02 +02:00
parent d7aa24a935
commit 9338d6eab8
11 changed files with 263 additions and 128 deletions
+35
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@@ -21,6 +21,41 @@ def load_config(config_path: Optional[Union[str, Path]] = None) -> PipelineConfi
return config_manager.get_config()
def setup_config_and_logging(
config_path: Optional[Path] = None,
env: str = "development"
) -> PipelineConfig:
"""
Unified configuration loading and logging setup for all entrypoint scripts.
Args:
config_path: Direct path to config file (takes precedence over env)
env: Environment name (defaults to "development")
Returns:
Loaded configuration object
"""
# Determine config path
if config_path is None:
config_path = Path("config") / f"pipeline.{env}.yaml"
# Load configuration
config = ConfigManager(config_path).load_config()
# Setup logging
setup_logging(config)
# Ensure required directories exist
from core.utils import ensure_directories
ensure_directories(config)
logging.info(f"Loaded configuration: {config.name} v{config.version}")
logging.info(f"Environment: {config.environment}")
logging.info(f"Config file: {config_path}")
return config
def setup_logging(config: PipelineConfig):
"""Setup logging based on configuration"""
+5 -1
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@@ -1,5 +1,5 @@
from dataclasses import field
from typing import Dict
from typing import Dict, Optional
from pydantic import BaseModel
@@ -20,3 +20,7 @@ class DataConfig(BaseModel):
split_by_gender: bool = True
evaluation_fraction: float = 0.2
random_seed: int = 42
# Dataset size limiting options
max_dataset_size: Optional[int] = None
balance_by_sex: bool = False
+64 -2
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@@ -44,9 +44,71 @@ class DataLoader:
raise ValueError(f"Unable to decode {filepath} with any encoding: {encodings}")
def load_csv_complete(self, filepath: Union[str, Path]) -> pd.DataFrame:
"""Load complete CSV file into memory"""
"""Load complete CSV file into memory with size limiting and balancing"""
chunks = list(self.load_csv_chunked(filepath))
return pd.concat(chunks, ignore_index=True) if chunks else pd.DataFrame()
if not chunks:
return pd.DataFrame()
df = pd.concat(chunks, ignore_index=True)
# Apply dataset size limiting if configured
if self.config.data.max_dataset_size is not None:
df = self._limit_dataset_size(df)
return df
def _limit_dataset_size(self, df: pd.DataFrame) -> pd.DataFrame:
"""Limit dataset size with optional sex balancing"""
max_size = self.config.data.max_dataset_size
if max_size is None or len(df) <= max_size:
return df
if self.config.data.balance_by_sex and "sex" in df.columns:
return self._balanced_sample(df, max_size)
else:
# Simple random sampling
return df.sample(n=max_size, random_state=self.config.data.random_seed)
def _balanced_sample(self, df: pd.DataFrame, max_size: int) -> pd.DataFrame:
"""Sample data with balanced sex distribution"""
# Get unique sex values
sex_values = df["sex"].dropna().unique()
if len(sex_values) == 0:
logging.warning(f"No valid values found in sex column 'sex', using random sampling")
return df.sample(n=max_size, random_state=self.config.data.random_seed)
# Calculate samples per sex category
samples_per_sex = max_size // len(sex_values)
remaining_samples = max_size % len(sex_values)
balanced_samples = []
for i, sex in enumerate(sex_values):
sex_df = df[df["sex"] == sex]
# Distribute remaining samples to first categories
current_samples = samples_per_sex + (1 if i < remaining_samples else 0)
current_samples = min(current_samples, len(sex_df))
if current_samples > 0:
sample = sex_df.sample(n=current_samples, random_state=self.config.data.random_seed + i)
balanced_samples.append(sample)
logging.info(f"Sampled {current_samples} records for sex '{sex}'")
if not balanced_samples:
logging.warning("No balanced samples could be created, using random sampling")
return df.sample(n=max_size, random_state=self.config.data.random_seed)
result = pd.concat(balanced_samples, ignore_index=True)
# Shuffle the final result
result = result.sample(frac=1, random_state=self.config.data.random_seed).reset_index(drop=True)
logging.info(f"Created balanced dataset with {len(result)} records from {len(df)} total records")
return result
@classmethod
def save_csv(